{ "_id": "6abcd2fd99f7aa8c6aa4c5c5", "Package": "topomatch", "Type": "Package", "Title": "Match toponyms by similarity", "Version": "0.5", "Author": "Facundo Muñoz ", "Maintainer": "Facundo Muñoz ", "Description": "Wraps local-global alignment algorithm borrwed from\npackage Biostrings Works better than global alignment and\nrequires less fine-tuning (although is considerably slower too)\nhttps://ro-che.info/articles/2016-12-11-local-alignment. Allows\nto inspect the matching and act accordingly.", "biocViews": "", "License": "GPL-3", "Encoding": "UTF-8", "RoxygenNote": "7.3.2", "Config/testthat/edition": "3", "Config/pak/sysreqs": "zlib1g-dev", "Repository": "https://cirad-astre.r-universe.dev", "Date/Publication": "2024-10-14 19:34:33 UTC", "RemoteUrl": "https://forge.inrae.fr/umr-astre/topomatch", "RemoteRef": "HEAD", "RemoteSha": "bec484b03410ffd2dc201e417697872e9b2d137c", "NeedsCompilation": "no", "Packaged": { "Date": "2026-09-30 08:38:50 UTC", "User": "root" }, "_user": "cirad-astre", "_type": "src", "_file": "topomatch_0.5.tar.gz", "_fileid": "https://r2.ropensci.org/474069c58a8c940e58e540cc604ae7e46be867d849cc485852b83d8dd50b12c4", "_filesize": 94482, "_sha256": "474069c58a8c940e58e540cc604ae7e46be867d849cc485852b83d8dd50b12c4", "_expires": "2027-01-08T09:14:35.000Z", "_created": "2026-09-30T08:38:50.000Z", "_published": "2026-09-30T09:14:37.118Z", "_jobs": [ { "job": 109808055570, "time": 169, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11086445074" }, { "job": 109808055599, "time": 168, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11085758020" }, { "job": 109808055742, "time": 113, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "11087716039" }, { "job": 109808055644, "time": 150, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11087685389" }, { "job": 109806812593, "time": 220, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11086345084" }, { "job": 109808055853, "time": 99, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11085513400" }, { "job": 109808055609, "time": 100, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11085513409" }, { "job": 109808055595, "time": 97, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "11085199860" }, { "job": 109808055694, "time": 99, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11085593383" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/cirad-astre/actions/runs/36690619821", "_status": "success", "_upstream": "https://forge.inrae.fr/umr-astre/topomatch", "_commit": { "id": "bec484b03410ffd2dc201e417697872e9b2d137c", "author": "Facundo Muñoz ", "committer": "Facundo Muñoz ", "message": "Bump package version.\n", "time": 1728934473 }, "_maintainer": { "name": "Facundo Muñoz", "email": "facundo.munoz@cirad.fr", "login": "famuvie", "description": "Bayesian methods and Spatial(-temporal) statistics applied to the interplay between life sciences and the environment", "uuid": 5693966 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "pwalign", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "forge-umr-astre", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_userbio": { "uuid": 39591813, "type": "organization", "name": "Cirad - UMR ASTRE. Also at https://gitlab.cirad.fr/astre/ and https://forge.inrae.fr/umr-astre/", "followers": 1, "description": "Animals, Health, Territories, Risks and Ecosystems" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/topomatch" }, "_searchresults": 0, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/readme.html", "extra/readme.md", "extra/topomatch.html" ], "_cranurl": false, "_exports": [ "best_matches", "exact_matches", "similar_matches", "topomatch", "transcribe", "trim", "unmatched" ], "_help": [ { "page": "best_matches", "title": "Best matches", "topics": [ "best_matches" ] }, { "page": "exact_matches", "title": "Exact toponym matches", "topics": [ "exact_matches" ] }, { "page": "similar_matches", "title": "Similar toponym matches", "topics": [ "similar_matches" ] }, { "page": "topomatch", "title": "Toponomy matching", "topics": [ "topomatch" ] }, { "page": "transcribe", "title": "Transcribe toponyms according to a topomatch table", "topics": [ "transcribe" ] }, { "page": "trim", "title": "Trim whitespaces", "topics": [ "trim" ] }, { "page": "unmatched", "title": "Unmatched toponyms", "topics": [ "unmatched" ] } ], "_readme": "https://forge.inrae.fr/umr-astre/topomatch/raw/HEAD/README.md", "_rundeps": [ "BiocGenerics", "Biostrings", "crayon", "generics", "IRanges", "pwalign", "S4Vectors", "Seqinfo", "XVector" ], "_score": 1.6989700043360187, "_indexed": false, "_nocasepkg": "topomatch", "_universes": [ "cirad-astre" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.5", "date": "2026-09-30T08:41:05.000Z", "distro": "resolute", "commit": "bec484b03410ffd2dc201e417697872e9b2d137c", "fileid": "https://r2.ropensci.org/0eab923fb07b803527684dc19f2a2492437e18fc077b0ce04e287e5fdff0b95e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cirad-astre/actions/runs/36690619821" }, { "r": "4.6.1", "os": "linux", "version": "0.5", "date": "2026-09-30T08:41:12.000Z", "distro": "resolute", "commit": "bec484b03410ffd2dc201e417697872e9b2d137c", "fileid": "https://r2.ropensci.org/1c2239433fd785d915bcc86c723c264b1f9086de666063deef0a55928fa3c5db", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cirad-astre/actions/runs/36690619821" }, { "r": "4.5.3", "os": "mac", "version": "0.5", "date": "2026-09-30T09:13:36.000Z", "commit": "bec484b03410ffd2dc201e417697872e9b2d137c", "fileid": "https://r2.ropensci.org/18516c56155bc68419394ed8b911713dca3e49367700c6f29ceda5442d7be2d8", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cirad-astre/actions/runs/36690619821" }, { "r": "4.6.1", "os": "mac", "version": "0.5", "date": "2026-09-30T09:10:45.000Z", "commit": "bec484b03410ffd2dc201e417697872e9b2d137c", "fileid": "https://r2.ropensci.org/4032a3dc64a910502b4f92bdf29fc628f2adbe57d2c2c88ceb3b5cb653846f6b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cirad-astre/actions/runs/36690619821" }, { "r": "4.6.0", "os": "wasm", "version": "0.5", "date": "2026-09-30T08:40:50.000Z", "commit": "bec484b03410ffd2dc201e417697872e9b2d137c", "fileid": "https://r2.ropensci.org/462782b1cffac719676262e6b5207cfa88771012d3fb4d1d42d2250abb811d3e", "status": "success", "buildurl": "https://github.com/r-universe/cirad-astre/actions/runs/36690619821" }, { "r": "4.7.0", "os": "win", "version": "0.5", "date": "2026-09-30T08:40:02.000Z", "commit": "bec484b03410ffd2dc201e417697872e9b2d137c", "fileid": "https://r2.ropensci.org/5e406f5983feaba935e9785e2654a42b699f785cb0518621671378dce05e182d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cirad-astre/actions/runs/36690619821" }, { "r": "4.5.3", "os": "win", "version": "0.5", "date": "2026-09-30T08:39:54.000Z", "commit": "bec484b03410ffd2dc201e417697872e9b2d137c", "fileid": "https://r2.ropensci.org/a1e1955979ad77c168bd719480c2e177ab13066aa248aa08a1cbd1bf34b2dcba", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cirad-astre/actions/runs/36690619821" }, { "r": "4.6.1", "os": "win", "version": "0.5", "date": "2026-09-30T08:39:54.000Z", "commit": "bec484b03410ffd2dc201e417697872e9b2d137c", "fileid": "https://r2.ropensci.org/0fca24613230c2d2e01b9b78746ba4c33544adb91726c2c6c2070b1d6ac2c5df", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/cirad-astre/actions/runs/36690619821" } ] }