Package: spreadrate
Type: Package
Title: Estimate the spread-rate of epidemics
Version: 0.1.13
Date: 2019-11-13
Authors@R: person("Facundo", "Muñoz", email = "facundo.munoz@cirad.fr",
        role = c("aut", "cre"), comment = c(ORCID =
        "0000-0002-5061-4241"))
Description: Estimate the local velocity of propagation of an epidemic
        event, given dates and locations of observed cases. The method
        estimates the surface of first date of invasion by
        interpolation of the earliest observations in a neighbourhood
        and derives the local spread rate as the inverse slope of the
        surface. Quantify the estimation uncertainty by a Monte Carlo
        approach. Visualise and simulate the spatio-temporal progress
        of epidemics.
Depends: R (>= 3.2), sf, raster
License: GPL-3 | file LICENSE
Language: en-GB
Encoding: UTF-8
URL: https://umr-astre.pages.mia.inra.fr/spreadrate
BugReports: https://forgemia.inra.fr/umr-astre/spreadrate/issues
Imports: fields, furrr, lwgeom, sp
Suggests: INLA, testthat (>= 2.1.0), ggplot2
Additional_repositories: https://inla.r-inla-download.org/R/testing
RoxygenNote: 6.1.1
Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev
        libssl-dev libproj-dev libsqlite3-dev libudunits2-dev
Repository: https://cirad-astre.r-universe.dev
Date/Publication: 2019-11-14 13:01:07 UTC
RemoteUrl: https://forge.inrae.fr/umr-astre/spreadrate
RemoteRef: HEAD
RemoteSha: 0fa071c495b49f43ae391485e41fc9cd624c6ff4
NeedsCompilation: no
Packaged: 2026-10-05 08:57:11 UTC; root
Author: Facundo Muñoz [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-5061-4241>)
Maintainer: Facundo Muñoz <facundo.munoz@cirad.fr>