No packages match

mapMCDA - Produce an epidemiological risk map by weighting multiple risk factors

Use a Shiny interface to help users import multiple layers of risk factors, scale and combine them using a Multi-Criteria Decision Analysis approach to produce a risk map as an outcome.

Last updated

3.30 score

sit - Analyse Mark-Release-Recapture Data from Sterile Insect Technique (SIT) Field Experiments

Import field data about the study design such as the location and types of adult and egg traps, the release events, the trap surveys and the egg hatches. Provide functions to compute and plot various parameters of interest concerning competitiveness of sterile males, dispersal behaviour, survival rates and density of the wild male population.

Last updated

2.83 score 134 scripts

crashbayes - Crash Course On Bayesian Regression Modelling

Code, data and vignettes for a short (< 1 day) practical course on Bayesian Statistics.

Last updated

2.70 score

practicalbayes - Package for the doctoral training 'Régression bayésienne en pratique'

Dependencies and datasets used in the training. No functionality is provided except a graphic theme. Only convenience setup.

Last updated

2.18 score

topomatch - Match toponyms by similarity

Wraps local-global alignment algorithm borrwed from package Biostrings Works better than global alignment and requires less fine-tuning (although is considerably slower too) https://ro-che.info/articles/2016-12-11-local-alignment. Allows to inspect the matching and act accordingly.

Last updated

1.70 score

spreadrate - Estimate the spread-rate of epidemics

Estimate the local velocity of propagation of an epidemic event, given dates and locations of observed cases. The method estimates the surface of first date of invasion by interpolation of the earliest observations in a neighbourhood and derives the local spread rate as the inverse slope of the surface. Quantify the estimation uncertainty by a Monte Carlo approach. Visualise and simulate the spatio-temporal progress of epidemics.

Last updated

1.70 score

geonetwork - Geographic Networks

Provides classes and methods for handling networks or graphs whose nodes are geographical (i.e. locations in the globe). The functionality includes the creation of objects of class geonetwork as a graph with node coordinates, the computation of network measures, the support of spatial operations (projection to different Coordinate Reference Systems, handling of bounding boxes, etc.) and the plotting of the geonetwork object combined with supplementary cartography for spatial representation.

Last updated

1.00 score 1 scripts 264 downloads